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Revealing the hidden lives of underground animals with Magneto-Inductive tracking Andrew Markham Stephen Ellwood Niki Trigoni David Macdonald Computing Laboratory Wildlife Conservation Research Unit University of Oxford University of Oxford


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Revealing the hidden lives of underground animals with Magneto-Inductive tracking

Andrew Markham Niki Trigoni Stephen Ellwood David Macdonald

Computing Laboratory University of Oxford

Wildlife Conservation Research Unit University of Oxford 5 November 2010: ACM SenSys

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

1 Motivation 2 Steps in MI localization 3 System Design 4 Results 5 Limitations and Lessons learnt 6 Summary

Andrew Markham SenSys 2010 2/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Current tracking approaches

Tracking animals above ground is relatively well researched

ZebraNet - GPS-WSN Virtual Fencing - GPS-WSN TurtleNet - GPS-WSN WildSensing - RFID-WSN ...

Andrew Markham SenSys 2010 3/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

What about burrowing animals?

Example burrowing species: badgers Nocturnal medium sized carnivores (8 kg) Live in extensive (20 m x 10 m) setts Tunnels between 1 and 3 m deep typically 1 to 20 badgers in a sett

Andrew Markham SenSys 2010 4/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

What technology can be used?

How can we track animals underground? Radio + Soil = no signal Digging out a den destroys it Ground penetrating radar (GPR) does not indicate positions of animals

Andrew Markham SenSys 2010 5/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

What is not affected by soil?

Magnetic fields are unaffected by:

Soil Water Air Vegetation

Magnetic fields are affected by metal, but luckily, there is not much of that in ancient woodlands!

Andrew Markham SenSys 2010 6/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Steps in MI localization

1 Generation of magnetic fields 2 Sensing and compression 3 Information transfer 4 Localization

Andrew Markham SenSys 2010 7/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Steps in MI localization

1 Generation of magnetic fields 2 Sensing and compression 3 Information transfer 4 Localization

Compare with well known RF RSSI based techniques

Andrew Markham SenSys 2010 7/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Step 1: Generation of magnetic fields

Andrew Markham SenSys 2010 8/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Step 1: Generation of magnetic fields

Andrew Markham SenSys 2010 9/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

RSSI vs MI: Equations

Spatial distribution of field is more complex for MI RSSI

RSSI(x, y, z) = α0 + α1 log(r)

MI

Bz (x, y, z) = µ0I 4π

4

  • a=1

[ (−1)ada ra[ra + (−1)a+1ca] − Ca ra[ra + da] ] Bx (x, y, z) = µ0I 4π

4

  • a=1

[ (−1)a+1z ra[ra + da] ] By (x, y, z) = µ0I 4π

4

  • a=1

[ (−1)a+1z ra[ra + (−1)a+1ca] ] |B| =

  • Bx 2 + By 2 + Bz 2

Andrew Markham SenSys 2010 10/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

RSSI vs MI: Equations

Spatial distribution of field is more complex for MI Can’t be treated as point source RSSI

RSSI(x, y, z) = α0 + α1 log(r)

MI

Bz (x, y, z) = µ0I 4π

4

  • a=1

[ (−1)ada ra[ra + (−1)a+1ca] − Ca ra[ra + da] ] Bx (x, y, z) = µ0I 4π

4

  • a=1

[ (−1)a+1z ra[ra + da] ] By (x, y, z) = µ0I 4π

4

  • a=1

[ (−1)a+1z ra[ra + (−1)a+1ca] ] |B| =

  • Bx 2 + By 2 + Bz 2

Andrew Markham SenSys 2010 10/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

RSSI vs MI: Decay

Magnetic fields fall off more rapidly RSSI

RSSI ∝ 1 r 2

40 dB/decade MI

|B| ∝ 1 r 3

60 dB/decade

Andrew Markham SenSys 2010 11/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

RSSI vs MI: Decay

Magnetic fields fall off more rapidly Range less than traditional radio RSSI

RSSI ∝ 1 r 2

40 dB/decade MI

|B| ∝ 1 r 3

60 dB/decade

Andrew Markham SenSys 2010 11/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

RSSI vs MI: Antennas

Magnetic field controlled by size and shape of generating coil RSSI

10 5 5 10 10 5 5 10

MI

10 5 5 10 10 5 5 10

Andrew Markham SenSys 2010 12/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

RSSI vs MI: Antennas

Magnetic field controlled by size and shape of generating coil RSSI

10 5 5 10 10 5 5 10

MI

10 5 5 10 10 5 5 10

Andrew Markham SenSys 2010 12/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

RSSI vs MI: Antennas

Magnetic field controlled by size and shape of generating coil RSSI

10 5 5 10 10 5 5 10

MI

10 5 5 10 10 5 5 10

Andrew Markham SenSys 2010 12/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

RSSI vs MI: Antennas

Magnetic field controlled by size and shape of generating coil RSSI

10 5 5 10 10 5 5 10

MI

10 5 5 10 10 5 5 10

Andrew Markham SenSys 2010 12/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

RSSI vs MI: Antennas

Magnetic field controlled by size and shape of generating coil Simple to alter field patterns to optimize localization RSSI

10 5 5 10 10 5 5 10

MI

10 5 5 10 10 5 5 10

Andrew Markham SenSys 2010 12/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

RSSI vs MI: Multipath and Penetration

MI penetrates any non-metallic objects and does not suffer from multipath RSSI

0.02 0.04 0.06 0.08 0.1

Distance

6 7 8 9 10 11 12 13 14

RSSI

MI

0.02 0.04 0.06 0.08 0.1

Distance

6 7 8 9 10 11 12 13 14

B-field

Andrew Markham SenSys 2010 13/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

RSSI vs MI: Multipath and Penetration

MI penetrates any non-metallic objects and does not suffer from multipath Environmental obstacles do not affect MI localization accuracy RSSI

0.02 0.04 0.06 0.08 0.1

Distance

6 7 8 9 10 11 12 13 14

RSSI

MI

0.02 0.04 0.06 0.08 0.1

Distance

6 7 8 9 10 11 12 13 14

B-field

Andrew Markham SenSys 2010 13/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Step 2: Sensing and compression

Andrew Markham SenSys 2010 14/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Animal Tag: MI Sensor

MI sensor detects signals from three orthogonal transponders Simultaneously measures RSSI Vector magnitude taken to ensure rotational invariance |B| =

  • Bx 2 + By 2 + Bz 2

Andrew Markham SenSys 2010 15/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

RSSI vs MI: Energy to localize

MI sensor operates at low frequency (125 kHz) and is much more energy efficient than RF RSSI

255 µJ

MI

2.4 µJ

Andrew Markham SenSys 2010 16/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

RSSI vs MI: Energy to localize

MI sensor operates at low frequency (125 kHz) and is much more energy efficient than RF 100 times less energy - allows for continuous tracking RSSI

255 µJ

MI

2.4 µJ

Andrew Markham SenSys 2010 16/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Animal Tag: Power budget

Underground Aboveground 0.05 0.1 0.15 0.2 0.25 0.3

Average current (mA)

Processor Data Beacons Flash MI Sensor

Andrew Markham SenSys 2010 17/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Animal Tag: Power budget

Note that the majority of energy is used by the CPU, not by localization

Underground Aboveground 0.05 0.1 0.15 0.2 0.25 0.3

Average current (mA)

Processor Data Beacons Flash MI Sensor

Andrew Markham SenSys 2010 17/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Animal Tag: Wavelet Compression

Each collar typically receives 250 000 readings per day

Andrew Markham SenSys 2010 18/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Animal Tag: Wavelet Compression

Each collar typically receives 250 000 readings per day 7 bytes per record (antenna id, timestamp, strength) = 1.7 Mbytes per day

Andrew Markham SenSys 2010 18/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Animal Tag: Wavelet Compression

Each collar typically receives 250 000 readings per day 7 bytes per record (antenna id, timestamp, strength) = 1.7 Mbytes per day Break into streams for each antenna = 300 kbytes per day

Andrew Markham SenSys 2010 18/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Animal Tag: Wavelet Compression

Each collar typically receives 250 000 readings per day 7 bytes per record (antenna id, timestamp, strength) = 1.7 Mbytes per day Break into streams for each antenna = 300 kbytes per day Can reduce further - lots of similarity between subsequent readings

Andrew Markham SenSys 2010 18/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Animal Tag: Wavelet Compression

Haar Wavelet Transform Elias-Gamma Encoding

0: 1 1: 010 2: 011 3: 00100 4: 00101 5: 00110 6: 00111 7: 0001000

Reconstruction at basestation

Andrew Markham SenSys 2010 18/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Animal Tag: Wavelet Compression

Haar Wavelet Transform Elias-Gamma Encoding

0: 1 1: 010 2: 011 3: 00100 4: 00101 5: 00110 6: 00111 7: 0001000

Reconstruction at basestation

256 bytes 33 bytes

Andrew Markham SenSys 2010 18/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Animal Tag: Wavelet Compression

Each collar typically receives 250 000 readings per day 7 bytes per record (antenna id, timestamp, strength) = 1.7 Mbytes per day Break into streams for each antenna = 300 kbytes per day Can reduce further - lots of similarity between subsequent readings 50 to 100 kbytes per day

Andrew Markham SenSys 2010 18/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Step 3: Information transfer

Andrew Markham SenSys 2010 19/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Animal Tag: Data Transfer

Latency of many conventional WSN protocols too high Need to bulk transfer large amounts of data (100 kbyte) in a very short contact window (minutes) Simple high speed reliable data transfer with multiple channels Periodic beacons for localization above-ground Overall duty cycle 0.3%

Andrew Markham SenSys 2010 20/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Step 4: Localization

10 5 5 10 [m] 10 5 5 10 [m]

Andrew Markham SenSys 2010 21/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

RSSI vs MI: Localization algorithms

Field patterns for MI are highly non-linear RSSI

2 4 6 8 10 Distance [m] 10 20 30 40 50 60 Field strength [dB]

MI

2 4 6 8 10 Distance [m] 10 20 30 40 50 60 Field strength [dB]

Andrew Markham SenSys 2010 22/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

RSSI vs MI: Localization algorithms

Field patterns for MI are highly non-linear Use non-linear least squares methods RSSI

2 4 6 8 10 Distance [m] 10 20 30 40 50 60 Field strength [dB]

MI

2 4 6 8 10 Distance [m] 10 20 30 40 50 60 Field strength [dB]

Andrew Markham SenSys 2010 22/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

1 Motivation 2 Steps in MI localization 3 System Design 4 Results 5 Limitations and Lessons learnt 6 Summary

Andrew Markham SenSys 2010 23/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Design requirements and constraints

Zoologists interested in tracking animals underground posed the following requirements: Determine 3-D location within 50 cm Operate to a depth of at least 4 m Temporal resolution ∼ 1 s 3 month lifetime Lightweight

Andrew Markham SenSys 2010 24/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Antenna System

Generates time-multiplexed digitally modulated signals 125 kHz carrier frequency, Manchester coded 1300 bps Antennas act as resonant LC tanks

Antenna ID (2 bytes) Timestamp (4 bytes) CRC (1 byte) Andrew Markham SenSys 2010 25/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Animal Tag

Custom made tracking tags Atmel AVR-Zigbit Microcontroller and Transceiver AS3932 Analog Front End (AFE) 4 Mbyte Serial Flash Lithium thionyl chloride battery

Andrew Markham SenSys 2010 26/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Surface components

Basestation with SD storage T-mote Skys as above-ground ‘detection’ nodes

Andrew Markham SenSys 2010 27/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

1 Motivation 2 Steps in MI localization 3 System Design 4 Results 5 Limitations and Lessons learnt 6 Summary

Andrew Markham SenSys 2010 28/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Pre-deployment calibration

  • 10
  • 5

5 10

Distance [m]

10 20 30 40 50 60

Magnitude of magnetic field [dB] Measured Predicted

Andrew Markham SenSys 2010 29/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Pre-deployment tunnel test

1 1 2 3 4 x [m] 1.0 0.5 0.0 0.5 1.0 1.5 2.0 y [m]

Ground truth Coil positions Estimated locations

Andrew Markham SenSys 2010 30/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Deployment

4 adult badgers trapped in January 4 large loop antennas (4m × 1 m) installed around sett

Andrew Markham SenSys 2010 31/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Layout

−80 −60 −40 −20 20 40 60

x [m]

−30 −20 −10 10 20 30 40 50

y [m]

Surface nodes Holes

Andrew Markham SenSys 2010 32/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Layout

−80 −60 −40 −20 20 40 60

x [m]

−30 −20 −10 10 20 30 40 50

y [m]

Surface nodes Holes

Andrew Markham SenSys 2010 32/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Layout

−2 2 4 6 8 10 12

x [m]

−4 −2 2 4 6 8 10

y [m]

Holes Antennas

Andrew Markham SenSys 2010 32/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Overall Results

Collars lasted for between 36 and 68 days Over 7 million MI readings delivered to basestation All generated data correctly received Average compression factor 21 Horizontal accuracy 45 cm Vertical accuracy 90 cm

Andrew Markham SenSys 2010 33/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Badger Traces

5 6 7 8 9 10 11 x [m] 2 1 1 2 3 4 y [m]

2010-02-17 08:00:00 Badger C Badger D Hole

Andrew Markham SenSys 2010 34/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Badger Traces

5 6 7 8 9 10 11 x [m] 2 1 1 2 3 4 y [m]

2010-02-17 09:00:00 Badger C Badger D Hole

Andrew Markham SenSys 2010 34/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Badger Traces

5 6 7 8 9 10 11 x [m] 2 1 1 2 3 4 y [m]

2010-02-17 10:00:00 Badger C Badger D Hole

Andrew Markham SenSys 2010 34/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Badger Traces

Position information of this resolution has never before been captured on an underground animal

Andrew Markham SenSys 2010 34/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Tunnel Visualization

  • 1

1 3 5 7 9 11 x [m] 5 4 3 2 1

  • 1

y [m]

Hole

Andrew Markham SenSys 2010 35/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Tunnel Visualization

Tracking system also reveals tunnel structure and resource usage

Andrew Markham SenSys 2010 35/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Incorporation with traditional WSN

−80 −60 −40 −20 20 40 60

x [m]

−30 −20 −10 10 20 30 40 50

y [m]

Surface nodes Holes Detected

2010-02-19 01:00

Andrew Markham SenSys 2010 36/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Incorporation with traditional WSN

−80 −60 −40 −20 20 40 60

x [m]

−30 −20 −10 10 20 30 40 50

y [m]

Surface nodes Holes Detected

2010-02-19 02:00

Andrew Markham SenSys 2010 36/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Incorporation with traditional WSN

−80 −60 −40 −20 20 40 60

x [m]

−30 −20 −10 10 20 30 40 50

y [m]

Surface nodes Holes Detected

2010-02-19 03:00

Andrew Markham SenSys 2010 36/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Incorporation with traditional WSN

−80 −60 −40 −20 20 40 60

x [m]

−30 −20 −10 10 20 30 40 50

y [m]

Surface nodes Holes Detected

2010-02-19 04:00

Andrew Markham SenSys 2010 36/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Incorporation with traditional WSN

−80 −60 −40 −20 20 40 60

x [m]

−30 −20 −10 10 20 30 40 50

y [m]

Surface nodes Holes Detected

2010-02-19 04:00

Andrew Markham SenSys 2010 36/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Incorporation with traditional WSN

5 6 7 8 9 10 11 12

x [m]

−2 −1 1 2 3 4 5

y [m]

Underground Trajectory Entrance Hole

2010-02-19 04:00

Andrew Markham SenSys 2010 36/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Incorporation with traditional WSN

Seamless tracking between above and below ground components

Andrew Markham SenSys 2010 36/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Lessons learnt

Antenna resonance problems - works in the lab Premature collar failure - battery chemistry Limited tracking volume of 5 m x 5 m - easy to scale to larger areas Badgers playing with equipment - put in trees Robust hardware and software essential - only two chances per year, no reboot! micro-SD cards are tiny - attach tag to find when dropped

Andrew Markham SenSys 2010 37/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Future directions

Optimal placement and sizing of antennas Increased resolution Large scale tests Application to other domains (aquatic, industrial) Integration with inertial and other sensors

Andrew Markham SenSys 2010 38/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Summary

First demonstration of MI as a feasible tracking technology for underground animals Allowed tracking which has never before been possible Real world deployment revealed interesting animal behaviour Extremely low power localization technique

Andrew Markham SenSys 2010 39/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Thanks

The WildSensing Team: Bence, Cecilia, Kharsim, Rick, Salvo and Vlad Dr Chris Newman, Dr Christina Beusching and the Badger Project EPSRC (EP/E013678/1) and the Peoples Trust for Endangered Species

Andrew Markham SenSys 2010 40/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Questions

Andrew Markham andrew.markham@comlab.ox.ac.uk www.comlab.ox.ac.uk/people/andrew.markham/

Andrew Markham SenSys 2010 41/42

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Motivation Steps in MI localization System Design Results Limitations and Lessons learnt Summary

Acceleration

Andrew Markham SenSys 2010 42/42