Some extracted slides from DAC presentation ENCODE DAC Update DAC - PowerPoint PPT Presentation

Some extracted slides from DAC presentation

ENCODE DAC Update DAC PIs DAC co-Is Project manager Manolis Kellis Shirley Liu Rafa Irizarry Zhiping Weng Jill Moore Anshul Kundaje Roderic Guigó Bill Noble Mark Gerstein Asilomar Conference Center DAC Update – ENCODE 2019

STARRPeaker: unbiased identification of enhancers from WHG-STARR-seq Donghoon Lee Poster #38 Gerstein DAC Update – ENCODE 2019 doi: https://doi.org/10.1101/694869 (bioRxiv)

ESPRNN: Epigenome-base Splicing Prediction using a Recurrent Neural Network Gerstein DAC Update – ENCODE 2019 https://github.com/gersteinlab/esprnn

Joint TF-RBP regulatory network hierarchy Manuscript currently available on bioRXiv Gerstein DAC Update – ENCODE 2019 Zhang…Gerstein (2020) Nature Communications

Changes in TF networks between cell types Metrics for Network Change LDA Topics GM12878 v K562 Manuscript currently available on bioRXiv Gerstein DAC Update – ENCODE 2019 Zhang…Gerstein (2020) Nature Communications

Rewiring index for different networks Gerstein DAC Update – ENCODE 2019 Zhang…Gerstein (2020) Nature Communications