Workshop 17.5: Reproducible Research Murray Logan 10 Mar 2019 # - - PowerPoint PPT Presentation

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Oct 03, 2023 662 likes •756 views

Workshop 17.5: Reproducible Research Murray Logan 10 Mar 2019 # A Heading ## A sub heading **This** word is in emphasised. * An unordered list - sub-item Markdown Markdown is a simple markup language Designed to portray some

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Workshop 17.5: Reproducible Research

Murray Logan 10 Mar 2019

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Markdown

Markdown is a simple markup language
Designed to portray some structure in

plain text

# A Heading ## A sub heading **This** word is in emphasised. * An unordered list

sub-item
Universal conversion language

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Markdown and Pandoc

pandoc

example.md text, citations, tables, links figure.png references.bib example.html references fjgure example.tex example.pdf references fjgure

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Markdown and pandoc

Metadata

YAML
title: This is the title

author: D. Author date: 12-03-2019

utput: html_document

...

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Rmarkdown

Combination of R and markdown
title: This is the title

author: D. Author

Section 1

=========== Text with embedded R code ```R summary mean(rnorm(10)) ```

.Rmd

title: This is the title

author: D. Author

Section 1

=========== Text with embedded R code mean(rnorm(10)) ## 0.1838261

.md knit pandoc .docx .html .pdf L

EX render

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Rmarkdown

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Rmarkdown

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Rmarkdown

Examples using Rstudio

https://github.com/pcinereus/Rmarkdown-examples.git